Insertion junction: CLIP2.078714_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078714
Chromosome:chromosome 16
Location:2442270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g660050 CMT1B (1 of 2) PTHR12608//PTHR12608:SF7 - TRANSMEMBRANE PROTEIN HTP-1 RELATED // GDT1-LIKE PROTEIN 2, CHLOROPLASTIC; Mn and/or Ca transport 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCACGCGCGCCTCGTGCTGCTACGTGTTGCTTGGGACAATCTTTTCG
Internal bar code:GATAAGGTTTACGTTTAGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:988
LEAP-Seq percent confirming:83.5443
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCATCAGCGAGAACAGC
Suggested primer 2:TACGGGTAGTTGTCACGTGC