Insertion junction: CLIP2.078715_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.078715
Chromosome:chromosome 7
Location:5841797
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g353650 (1 of 29) PF00612 - IQ calmodulin-binding motif (IQ) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGTGCGGAGGCCCTAAAGCGATTCAGACTCTATCCTGGCCATACACT
Internal bar code:CGTGGGACTACCGGCCGATAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:52
LEAP-Seq percent confirming:11.7647
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTAATCTGACGGCGCGTTTC
Suggested primer 2:GAGCCACCTTTCTTGTCCGA