Insertion junction: CLIP2.078720_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078720
Chromosome:chromosome 13
Location:5172783
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g607350 CAH7 (1 of 2) PTHR11002:SF13 - BETA CARBONIC ANHYDRASE 1; Carbonic anhydrase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTGTGCACGGGACGTCAGGGTAGCTGCAGTTACGGACCGCCGCATTGC
Internal bar code:GTTAGGTATAGGAATGGGACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2953
LEAP-Seq percent confirming:82.6087
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTATCCCACCACAACGCA
Suggested primer 2:GTGTGTTGGTTTACGGCGTC