Insertion junction: CLIP2.078722_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078722
Chromosome:chromosome 17
Location:6022035
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g742700 CGLD30,HLM32 (1 of 1) PTHR22884:SF343 - PROTEIN MET-1, ISOFORM A; SET domain containing protein, putative histone methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCGTGTTGTGCTGGCCATGATGTCGCCTTCAGTTCGCGGCAGCCAC
Internal bar code:CGCAAGGTATCCTTCGTTTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:861
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTATTCACGCAGCCGAG
Suggested primer 2:CGTCCCCACACTCATTGACA