Insertion junction: CLIP2.078725_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078725
Chromosome:chromosome 13
Location:64645
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre13.g562250 FAP92 Flagellar Associated Protein 92; (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATACGGGCAGGCACCATACCGCCAGAGGTAGGCGTGCGGCCGTCCGGG
Internal bar code:TTGCGCTTTTGGCGTATTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:178
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGTGTACGGAGTGACAA
Suggested primer 2:ATTTTGCGCGTTGGGCTAAG