Insertion junction: CLIP2.078730_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078730
Chromosome:chromosome 3
Location:5973575
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189250 RAB11,RABA1 Small Rab-related GTPase; (1 of 1) K07904 - Ras-related protein Rab-11A (RAB11A) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGCTCGATCGCATGAGAGGTGGCAGCTCACACACCTCGCATGCCGTTC
Internal bar code:ACTTGTTCAACCGTAGGGCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3050
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGTGCACGAACGATTT
Suggested primer 2:TGCAGTGTCCCAAATTTGCG