Insertion junction: CLIP2.078736_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078736
Chromosome:chromosome 3
Location:5418210
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g183900 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATGAATAAAGCAGAGCGAAGAAGCAAAATGTGGTAAGAATTCTATTCG
Internal bar code:GTATCACAGGACTGTCAAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1496
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGGCTTCACCTTGAACTC
Suggested primer 2:CCGATGATAGAACCCAGGCC