Insertion junction: CLIP2.078738_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078738
Chromosome:chromosome 6
Location:3762429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278167 (1 of 1) PTHR21037:SF2 - MCG15614 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATGTACGGTACACCTGCGTGCATAAAGTTCTTTTGCCGCGGGGAATGA
Internal bar code:AGCGTATTAAGGCGATATTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4978
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGCGGTTATATTTGCGG
Suggested primer 2:GACTGGAAACGGGTACAGCA