Insertion junction: CLIP2.078738_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078738
Chromosome:chromosome 6
Location:3762455
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278167 (1 of 1) PTHR21037:SF2 - MCG15614 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAGCGCTCAAAGGCCGCCTAGGGCCCCAGCCAACGTCCTGCCTGAAC
Internal bar code:AATAGACTATTTAAGTGTTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4048
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGGAAACGGGTACAGCA
Suggested primer 2:GGCTGCGGTTATATTTGCGG