Insertion junction: CLIP2.078739_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078739
Chromosome:chromosome 12
Location:158713
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g484350 CKIN beta-gamma,SNRKBG1 regulatory subunit beta-gamma of snRK1 complex in Chlamydomonas; (1 of 1) K07200 - 5'-AMP-activated protein kinase, regulatory gamma subunit (PRKAG) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAGTACAGCTCAAGCTAAAATGCAGTCCTTGCCCAAAGGGCCTCTGT
Internal bar code:TGCATGATCAATGCTGATTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3520
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCCCACCCATACCACAC
Suggested primer 2:TGGCAGCCAATCGTCTCATT