Insertion junction: CLIP2.078741_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078741
Chromosome:chromosome 6
Location:6195061
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g292050 MMP21 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACCCCGCCACCCCGCGCCCACCCACCCCATGCCGCCCTGCAGGCGAC
Internal bar code:ACTCGCAGCTTCGGGAGGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:200
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGTGGGAAGAGGTGAGC
Suggested primer 2:CATCATCATGCCCAAGCTGC