Insertion junction: CLIP2.078745_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078745
Chromosome:chromosome 7
Location:87792
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g800764 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCGGAGTGCTTGACGCCCAGGGCGTAGGTGTTGCCAATGTTGGCCT
Internal bar code:GCTTTAGTTTTAGAGTAGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:336
LEAP-Seq percent confirming:27.7778
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGGCTTGAAGCGTGCAGA
Suggested primer 2:CGTGGAGGGGTGGTTATCAC