Insertion junction: CLIP2.078748_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078748
Chromosome:chromosome 10
Location:1847939
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g431000 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGCGCCGGGTTAGTTTCCTGTCTGACTGAATCGAGGTCTGGTCCCCGT
Internal bar code:GCTTAATATTGCGGGCCTCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4803
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTCGTCAGAGTGCACGAG
Suggested primer 2:TTGACGTGTAGTGTCTGCCC