Insertion junction: CLIP2.078760_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078760
Chromosome:chromosome 13
Location:2227965
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578012 (1 of 1) PTHR11061//PTHR11061:SF29 - RNA M5U METHYLTRANSFERASE FAMILY // SUBFAMILY NOT NAMED 5'UTR
Cre13.g578350 MPA11 Metallophosphoesterase/metallo-dependent phosphatase; (1 of 3) 3.1.3.26 - 4-phytase / Phytate 6-phosphatase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGCAGCTTGCGCGCTGTTTACATACATGGATGTGGTATTTCAGGATG
Internal bar code:CTATAGATCCCAGCCGGCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:131
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCAAACCGGTCCAGATAA
Suggested primer 2:GCTGCTGCTGCTGTTACTTC