Insertion junction: CLIP2.078769_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078769
Chromosome:chromosome 2
Location:3691085
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g100350 (1 of 2) PTHR31350:SF1 - F-BOX ONLY PROTEIN 21 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAGACTCAGGTGGTTGGCGTCGTACAACCGCTCAACCAACAACGATC
Internal bar code:TTGTAATCTCTTAGCCCTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:681
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAAGAGACTCGGGAGGT
Suggested primer 2:ATGCCGACAGTTTCAGGAGG