Insertion junction: CLIP2.078775_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.078775
Chromosome:chromosome 7
Location:2063060
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325950 ZSP1 (1 of 2) PTHR10783:SF44 - SPX DOMAIN-CONTAINING PROTEIN 1-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCATGGCGAGATAGCGACAGCTGTCCTGCTGACCAACTGGTAATTTC
Internal bar code:GAAGATACGAGTGCTTGGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:415
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCACCTTGCCAAACTGTG
Suggested primer 2:CCGTTCCCCTCCCAATGTAC