Insertion junction: CLIP2.078778_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078778
Chromosome:chromosome 16
Location:3958833
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g689550 PTK8 Putative tyrosine kinase; (1 of 10) PTHR23257//PTHR23257:SF520 - SERINE-THREONINE PROTEIN KINASE // IP11267P 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGACGGTGTCGCGCACGGCAATTATGCGGTTGAGAGCCAAGCTGTTG
Internal bar code:GAAGTTTTGATGACTACTCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3740
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTATTAGATGCGGCTGGC
Suggested primer 2:CAAAACTGTGCAGTCGCGAA