Insertion junction: CLIP2.078781_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.078781
Chromosome:chromosome 8
Location:3791776
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g381150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACACGCCACACACGCAAGTGACAGCCGCCCGTCCTTGCACAGCAAGCA
Internal bar code:CGTTTGCGGAGATGGCGGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1609
LEAP-Seq percent confirming:12.8205
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCATTGGGTGATGTATG
Suggested primer 2:GAGCAGCCATACTACCGGTC