Insertion junction: CLIP2.078786_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078786
Chromosome:chromosome 9
Location:4934675
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g403219 RPB5 DNA-directed RNA polymerase II, 23 kDa polypeptide; (1 of 1) K03013 - DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RPB5, POLR2E) CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTCGTGTTCTTCCCGGAGGAGCAGAAGGTGGGCGTCAAGACCATCAAG
Internal bar code:GTACTTGGTTCGAATTTGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:448
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCCTCATGCGGCTGGAAT
Suggested primer 2:GGGTCGGGCAGTTGTAATCA