Insertion junction: CLIP2.078790_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078790
Chromosome:chromosome 1
Location:1607888
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g008750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAGGTGCGTGCGTTCCGCGTTCGCGCCTTCGCCTTACGTACCGAGCAC
Internal bar code:CTCTGGAGTTCCGCAATGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1271
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CGACTGCGTTTGTGACTGTG
Suggested primer 2:ACACCAACACCAGCACAAGA