Insertion junction: CLIP2.078793_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078793
Chromosome:chromosome 3
Location:3064550
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g163950 CDO2 (1 of 2) 1.13.11.20 - Cysteine dioxygenase; Cysteine dioxygenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTCGCCGGTACCCATCGTCACATCCCTTGCTCTAGGGGCTCAGCCCA
Internal bar code:ATCTAGAAATACGTTGAATCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3646
LEAP-Seq percent confirming:40.4255
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCCAAAGCTGAGTTTGC
Suggested primer 2:AGTCGCACCCACATGCATAA