Insertion junction: CLIP2.078809_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078809
Chromosome:chromosome 14
Location:1215176
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g615800 (1 of 3) PTHR31563:SF1 - ION CHANNEL POLLUX-RELATED intron
Cre14.g801611 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCACACGCCCGCACGCCCACACGCCCACATGCCCACACGCCCGCACGC
Internal bar code:AGGCGGCCTCCGGAATCTACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:611
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTACCCGCGATAAGCCTG
Suggested primer 2:CACGCAAACAAACGCAAACC