Insertion junction: CLIP2.078816_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078816
Chromosome:chromosome 3
Location:819550
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g146347 (1 of 3) PTHR11220//PTHR11220:SF1 - HEME-BINDING PROTEIN-RELATED // HEME-BINDING PROTEIN 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAACCTGTTCCTCGCCTGGTACGGATTCAAGTTCCTCCGCCAGCAAGC
Internal bar code:TGATATGAGTGTAATCCACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1986
LEAP-Seq percent confirming:56.1644
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGCCAGTAGTTCAGCGT
Suggested primer 2:CGTCGACCTGTGTAACACCA