Insertion junction: CLIP2.078819_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078819
Chromosome:chromosome 10
Location:6178068
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre10.g462700 (1 of 1) K14397 - cleavage and polyadenylation specificity factor subunit 5 (NUDT21, CPSF5, CFIM25) 3'UTR
Cre10.g462750 (1 of 1) K11374 - elongator complex protein 2 (ELP2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCAGAGCTGGTGCTACAGGAGTCAAGGGATTGCTCAGTGTTGATGCAT
Internal bar code:GAGCAAGTGGTTTCGCTGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:716
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGACCTGCACGACAACC
Suggested primer 2:CCCAGGCAAGAGGAGAAAGG