Insertion junction: CLIP2.078820_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078820
Chromosome:chromosome 11
Location:843244
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre11.g467642 (1 of 2) PTHR27000:SF119 - LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM2-RELATED 5'UTR_intron
Cre11.g467643 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGAACGAAGCCATGCGTGTCGAACAGACTGCTGCTGTTCAAGTAATTT
Internal bar code:GTCGTGGTCTACGGTTTCATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1967
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GGTACAACTGGCAGTGTCGA
Suggested primer 2:ACAACAACCGCAGCATGTTC