Insertion junction: CLIP2.078821_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078821
Chromosome:chromosome 7
Location:1394382
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323000 DP1,TDP1 Transcription factor, E2F/dimerisation partner; (1 of 2) PTHR12548:SF9 - TRANSCRIPTION FACTOR DP outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAAAGCGCGGGAGGCCCACATTGGCCGCCCCGTGGAAGTGATGGCCAT
Internal bar code:GGTTGTCCAGGAACGTGCCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1439
LEAP-Seq percent confirming:64.9123
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTGTCAGCAATGGGTCT
Suggested primer 2:CTCGCGGTGCCTGTATATGT