Insertion junction: CLIP2.078821_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078821
Chromosome:chromosome 7
Location:1394383
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323000 DP1,TDP1 Transcription factor, E2F/dimerisation partner; (1 of 2) PTHR12548:SF9 - TRANSCRIPTION FACTOR DP outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGTCGCTCAAGGGGCCATAAACGTCTTCTGCGCCCCCTATACTACAA
Internal bar code:CAGGTCCTTAAACATCGCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1240
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCGGTGCCTGTATATGT
Suggested primer 2:CTGGTGTCAGCAATGGGTCT