Insertion junction: CLIP2.078824_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.078824
Chromosome:chromosome 6
Location:8341225
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g307450 SPL1 (1 of 1) K12825 - splicing factor 3A subunit 1 (SF3A1, SAP114); SF3A1 splicing factor 3a, subunit 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCGGTCCTGTGGCGCTGGGCCGTTGGGATGAGGCGCAGGATGGGGCC
Internal bar code:GCGAGAACTTACGTTGCACTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:268
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTCCATCTCCATGTCCG
Suggested primer 2:CCCCAACCCACTACTCACAC