Insertion junction: CLIP2.078825_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078825
Chromosome:chromosome 12
Location:9150502
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543650 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAACCGAATCCCAGAGCTGGAGCGCGAGCCTCTTGGAGCCCGCGAAGC
Internal bar code:TTGGACTTCCCCTACTGCCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1495
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCATGAGCTCCCAATTGT
Suggested primer 2:GGCCTGATAACGAGACCGAG