Insertion junction: CLIP2.078825_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078825
Chromosome:chromosome 12
Location:9150508
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543650 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTATTCAGCGGGCCCGGTTGCTGGCTTTTTGGGGCCGCGGTGCGTTCC
Internal bar code:GTTAGGGACTTGATAATCGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1584
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCTGATAACGAGACCGAG
Suggested primer 2:TGGCATGAGCTCCCAATTGT