Insertion junction: CLIP2.078833_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078833
Chromosome:chromosome 9
Location:1088826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g800994 (1 of 8) IPR000719//IPR001245//IPR011009 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCAGCACCTACGAAATAGCTCGGGCAGGCCCCGTTGCGCAAGCACCA
Internal bar code:CAAAAATAGCCTATCGGCGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2110
LEAP-Seq percent confirming:47.8723
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:TGACACGTCAAGACCTGGTG
Suggested primer 2:CACACACTTGCACAGCTCAC