Insertion junction: CLIP2.078834_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078834
Chromosome:chromosome 7
Location:5193537
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g348900 DNJ19 (1 of 1) K09537 - DnaJ homolog subfamily C member 17 (DNAJC17); DnaJ-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACCCTATCCTACCCGCTACCCTTGTCCATGCCCTCGCCTCCTTCCCCA
Internal bar code:CTTTATACGTAAAGCTAGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:336
LEAP-Seq percent confirming:28.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AATCAAATTACGCGCGACCG
Suggested primer 2:CTGGGTAGCCTCCAAACTGG