Insertion junction: CLIP2.078837_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078837
Chromosome:chromosome 8
Location:3485150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378800 (1 of 1) PTHR10071:SF159 - GATA TRANSCRIPTION FACTOR 26-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAGATGAAACGTTTATTTAATACGGGCGGCGGCGCTGCCAGGAAATCG
Internal bar code:TCGCAGGGGCTGTGGTAGGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3479
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCGGACTCTCAGGACTC
Suggested primer 2:CCTCCGAGAGAGACCAGTCA