Insertion junction: CLIP2.078840_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078840
Chromosome:chromosome 9
Location:4163309
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g399663 FXL7,FXL4 FixL-like PAS domain protein; (1 of 11) PF13426 - PAS domain (PAS_9) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGCTGCAGCCCCTCGTACAGGTCGCGGGCGCCCACATGGTACATGTA
Internal bar code:GGGTTTGGGTAACCTGACGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:575
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TACGAGGTCACACACAACGG
Suggested primer 2:ACATGGCCGTGCATAAGGAA