Insertion junction: CLIP2.078840_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.078840
Chromosome:chromosome 16
Location:4950203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686500 (1 of 1) PF03767 - HAD superfamily, subfamily IIIB (Acid phosphatase) (Acid_phosphat_B) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGTCCGGGTCCCGGCCTTCTCAAGTCCCATACATTGCATCTGCTCCAA
Internal bar code:CCGCGAGCACCCTTTAGATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2097
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGTGAGGAGGAGGGAGTC
Suggested primer 2:CGTATGACTCTGAGCCGCAT