Insertion junction: CLIP2.078843_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.078843
Chromosome:chromosome 6
Location:3352065
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800655 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGCAACCCCGGTGCTCCCCACAACCGCCGGAGGTCCCGCACTGCGCA
Internal bar code:GTAACGCTTGACTGGTCGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:616
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCTCACTCCCATCGGTGA
Suggested primer 2:AAAGAAAAACCGCAGCGACC