Insertion junction: CLIP2.078843_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078843
Chromosome:chromosome 8
Location:3505508
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g379050 (1 of 3) PF04438 - HIT zinc finger (zf-HIT) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGTAGGACGGGAATGGAGGCACGATTGGCAATTCTGCGGCAAGTTATG
Internal bar code:TCGAGGAGAGTACGGTTAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2955
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCGTACCGTATGCAGGG
Suggested primer 2:AGAGCTCAGAGCACTACGGA