Insertion junction: CLIP2.078846_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.078846
Chromosome:chromosome 9
Location:1436032
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399908 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTGGGGCATGGGGTCTGGCCAGGGGTAGTAAGAGTGCAACGAGATGT
Internal bar code:CATTGAATAGTGGTTTGTCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2056
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AACACTGGAGTCGGCGAAAT
Suggested primer 2:ATTAAGCTTGCAGCATCGCG