Insertion junction: CLIP2.078848_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078848
Chromosome:chromosome 3
Location:3639441
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g168350 (1 of 1) K06947 - polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] (GRC3, NOL9) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCTCAAGTGGCAGGCATTGGTGCGGTCAAGGTTGTGATGCAGAGCCAA
Internal bar code:TGTTATGTTAAGGGGGTGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:103
LEAP-Seq percent confirming:60.8696
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACAAGAAACCGCGCAAA
Suggested primer 2:GTAGCGACACCTCCACAACA