Insertion junction: CLIP2.078852_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078852
Chromosome:chromosome 16
Location:7949272
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g690767 (1 of 3) PF02737 - 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain (3HCDH_N) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCATCGCCCCGACTGCACACGGCGAGGGGCCACCGTGGCAAAACCCGT
Internal bar code:CAGATGGCGACCAGCCCAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:194
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGAGCTAAGCGTCTGAT
Suggested primer 2:TCGTCGTCTCCAAACACCAG