Insertion junction: CLIP2.078856_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078856
Chromosome:chromosome 6
Location:2961294
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g273650 (1 of 3) 1.11.2.3 - Plant seed peroxygenase / Soybean peroxygenase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGCGCCTATAAGCGCCGAGCATAACTTTCCACGCCGCTGACATTGC
Internal bar code:GTTCGGAAGTAAGGTCGTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2916
LEAP-Seq percent confirming:47.0588
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGGAACAACGCAAGAAA
Suggested primer 2:GGTATGCTCAACCCCTTGCT