Insertion junction: CLIP2.078863_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.078863
Chromosome:chromosome 1
Location:5010861
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g034800 (1 of 1) PTHR21477//PTHR21477:SF12 - FAMILY NOT NAMED // CF9 PROTEIN-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACTGCTCGGAAGTCCTGATGGGGACACGTGCTGGAAAGGAGCTGAGG
Internal bar code:TAGAGGCGAGGTGGTAAAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:907
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAAGGTCTCTTCCTGCAG
Suggested primer 2:GTAAGGGAGGTGCCTGAACG