Insertion junction: CLIP2.078865_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078865
Chromosome:chromosome 9
Location:288068
Confidence (%):40
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCTAAAAGTCGCCACTTTCCTGGCGTCGGTTCCTCCATTTGTCTATTA
Internal bar code:TATATGTGGCAGTGGATATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3084
LEAP-Seq percent confirming:27.5
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:58
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:ATGATAAGCCCCCGCAGATG
Suggested primer 2:ATCTGCGGGGGCTTATCATG