Insertion junction: CLIP2.078867_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078867
Chromosome:chromosome 9
Location:5568269
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409500 RPP25 Ribonuclease MRP subunit P25; (1 of 2) PF01918 - Alba (Alba) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAAACATCATTTGCCTAACACATAGGCAGTTGTGACCAAGCGTCCAAC
Internal bar code:CCCTCTCATGTCCCGACAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1772
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TACCTTTGGTCACGACTGCC
Suggested primer 2:TGCGCGCACATGATAGTAGT