Insertion junction: CLIP2.078869_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078869
Chromosome:chromosome 9
Location:6061106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412700 (1 of 3) PF01541 - GIY-YIG catalytic domain (GIY-YIG) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGACATGCAGGGCAACCTCCACCCAGGTGGAGCCTTAGCCTTAATTTG
Internal bar code:TGTAAGAAGAAACTGCAGCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1960
LEAP-Seq percent confirming:83.9286
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:TTAAACAGCGCTGCAACCAC
Suggested primer 2:GTGCCAGGTATGACACAGCT