Insertion junction: CLIP2.078881_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078881
Chromosome:chromosome 16
Location:5271627
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684022 (1 of 173) IPR029058 - Alpha/Beta hydrolase fold 3'UTR
Cre16.g684050 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCGTAAGAATCCGTGGCTTGAAGTTCGGCCCTGTCTACCATTGCGCC
Internal bar code:GTGGCTTAGCTCTTGGTACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2715
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAACGACAGACAGCAGGA
Suggested primer 2:CCACGACGCGAATCCTATGA