Insertion junction: CLIP2.078881_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078881
Chromosome:chromosome 16
Location:5271636
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684022 (1 of 173) IPR029058 - Alpha/Beta hydrolase fold 3'UTR
Cre16.g684050 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACGCAATCTCGTCTGCAGAGTTTTTTATTCATCAATGCATTCCTGTTA
Internal bar code:GTGGCTTAGCTCTTGGTACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1443
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGACGCGAATCCTATGA
Suggested primer 2:GTGAACGACAGACAGCAGGA