Insertion junction: CLIP2.078888_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078888
Chromosome:chromosome 11
Location:1275321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCTGGTCACCTTCCGCAGGTGCGCTGCGGCTCTGCATCGCGAGTGTGG
Internal bar code:AAAACTTGTACAAAGTTGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1178
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCACAGTTGTCAACAGCC
Suggested primer 2:CGACAGTGGTAAGGCAGGTT