Insertion junction: CLIP2.078888_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078888
Chromosome:chromosome 14
Location:1578453
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g618350 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCTCGAGCGCAGTGAGTAGTCGGAAACCAACTCATGCCCATGTGGATG
Internal bar code:TGCTACATTGAGGGTTAATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3840
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCATGTCTGTCAGCACC
Suggested primer 2:GCCGTCGCATACCGTACTAA