Insertion junction: CLIP2.078892_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.078892
Chromosome:chromosome 12
Location:9414495
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541250 NAR1E Putative nitrite transporter; (1 of 7) PTHR30520//PTHR30520:SF0 - FORMATE TRANSPORTER-RELATED // FORMATE TRANSPORTER 1-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCGCGCGCTCGGAACCGCTCGCGTCCCAGCAAAACTTTCCATGATGCC
Internal bar code:TCGGTTCGCCGACCCTGGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:125
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GACAATTGCGGCACAGGTTT
Suggested primer 2:CCGTCCTCGAGTATGCTGAC